Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015843994.1_cds_XP_016508891.1_21866
CDS Infomation

[gene=LOC107826428] [db_xref=GeneID:107826428] [protein=calcium-dependent protein kinase 28-like] [partial=3'] [exception=annotated by transcript or proteomic data] [protein_id=XP_016508891.1] [location=complement(join(<194..301,397..512,683..809,1291..1460,1610..1688,1774..1885,1977..2018,2129..2259,3398..3826))] [gbkey=CDS]
Sequence

ATGGGCAGCTGTTTTTCTAGCTCTAAAGTTAGTGGCTCAAATAGCAATACCCCTTCTACA
ACTACTACAAATGTAAATGTTCATCACAACCGTCCTTCAACAACAACAACAACAACAACT
GTTACATCAAGAAAACAAGAGGGGTCAAATTATAATAGAGATAAAGGTAATATTAATACA
AAAAACAGCCACCAAAAACAACAACCTAGGAGTTCTCAGCAGAATGTTGTTGTTAAGCCA
AATTCAAGAAGACAAAGTGGAGGGGTTATTCCTTGTGGGAAAAGAACAGATTTTGGGTAT
GATAAAGATTTTGATAAGAGGTATACTATTGGTAAATTGTTGGGTCATGGCCAATTTGGG
TATACATATGTTGCTACAGATAAATCTTCTGGAGATCGTGTTGCTGTTAAGAAAATTGAG
AAAAACAAGATGGTTCTTCCAATTGCGGTTGAGGATGTGAAACGAGAAGTCAAGATATTG
AAGGCCTTAGCTGGTCACGAGAACGTGGTTCAGTTCTATAATTCATTTGAGGATGATAAT
TATGTCTACATCGTAATGGAGTTATGTGAGGGTGGGGAACTATTGGACCGAATCTTGTCC
AAAAAAGATAGTCGATATACTGAGAAAGATGCGGCGATAGTTGTACGCCAGATGCTAAAA
GTGGCTGCTGAGTGTCATTTACATGGTCTGGTGCATCGAGATATGAAACCTGAGAATTTT
CTCTTTAAATCTTCAAAGGTGGATTCGCCATTAAAAGCCACAGATTTTGGTCTTTCAGAC
TTCATAAGACCAGGAAAAAAATTCCAAGACATTGTTGGCAGTGCATATTATGTAGCCCCG
GAGGTGTTAAAGCGTAGATCAGGACCTGAATCAGATGTATGGAGTATAGGTGTAATTACA
TACATTTTGCTATGTGGCCGTCGGCCCTTCTGGGACAAAACTGAGGATGGTATATTCAAG
GAGGTCTTACGAAACAAGCCTGATTTCCGTCGCAAGCCATGGCCAAACATAAGCAACAGT
GCTAAAGATTTTGTAAAGAAATTACTGGTGAAGGATCCGCGTGCTAGACTTACTGCCGCT
CAGGCCCTATCGCATCCATGGGTCCGAGAAGGAGGTGATGCATCTGAGATTCCACTCGAT
ATTTCTGTTTTATCCAACATGCGGCAATTTGTCAGATACAGTCGCCTAAAACAGTTCGCT
TTACGGGCGTTAGCTAGCACGCTTGATGAGGAGGAGCTCTCTGATCTGAAGGATCAATTT
TCTGCAATTGATGTGGATAAGAATGGTGTCATCAGTCTCGAAGAAATGAGACAG

Peptide Sequence

PEP ID

XP_016508891.1
PEP Infomation

PREDICTED: calcium-dependent protein kinase 28-like [Nicotiana tabacum]
Sequence

MGSCFSSSKVSGSNSNTPSTTTTNVNVHHNRPSTTTTTTTVTSRKQEGSNYNRDKGNINT
KNSHQKQQPRSSQQNVVVKPNSRRQSGGVIPCGKRTDFGYDKDFDKRYTIGKLLGHGQFG
YTYVATDKSSGDRVAVKKIEKNKMVLPIAVEDVKREVKILKALAGHENVVQFYNSFEDDN
YVYIVMELCEGGELLDRILSKKDSRYTEKDAAIVVRQMLKVAAECHLHGLVHRDMKPENF
LFKSSKVDSPLKATDFGLSDFIRPGKKFQDIVGSAYYVAPEVLKRRSGPESDVWSIGVIT
YILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPNISNSAKDFVKKLLVKDPRARLTAA
QALSHPWVREGGDASEIPLDISVLSNMRQFVRYSRLKQFALRALASTLDEEELSDLKDQF
SAIDVDKNGVISLEEMRQIDSNTDGLVDFPEFVAATLHVHQLEEHNSTKWQQRSQAAFEK
FDVDRDGFITPEELKMHTGLKGSIDPLLEEADIDKDGKISLSEFRRLLRTASMSSPTVRD
SRRNVAL

Transcript Sequence

Gene sequence data has not been registered.